There are three enzymes that S-methylate thiols: thiopurine methyltransferase (TPMT) and two enzymes that our lab has recently identified, alkyl thiol methyltransferase 1A and 1B (TMT1A and TMT1B). These enzymes have been studied predominantly because of their role in drug metabolism. Thiopurines, potent chemotherapeutics, are inactivated through thiol methylation by TPMT. While there are not many drugs that contain alkyl thiols, nearly every alkyl thiol-containing drug is metabolized via S-methylation, presumably mediated by TMT1A or TMT1B. With any drug used there is a possibility of drug-drug interactions (DDI) that can lead to a drug concentration in the cell that is above the therapeutic index, leading to toxicity. Thus, it is important to have a method that allows for quick determination of possible DDIs in the body. In this work, using ligation cloning and nickel affinity chromatography, I recombinantly expressed and purified TPMT from bacteria. I then developed an absorbance-based high throughput assay to compare the substrate specificity of TPMT with that of recombinant TMT1A and TMT1B. I determined that TMT1A and TMT1B preferentially methylate alkyl thiols, while TPMT exclusively methylates thiols involved in a conjugated electron system. Although these enzymes serve a crucial role as drug metabolizing enzymes, it is not known if these enzymes have a function beyond drug metabolism. To study the endogenous role of these enzymes beyond drug metabolism, I am utilizing my developed assay to screen for compounds that can specifically inhibit TMT1A, TMT1B, and TPMT. In addition, the assay is optimized in order to screen for potential drug-drug interactions that might result due to interactions with TPMT. Based on literature, I expect most benzoic acid derivatives and similar structured compounds to result in DDIs.