Over the last four decades, marine community composition has changed in the San Juan Archipelago, showing a density decline in the scleractinian (hard skeleton) solitary cup coral Balanophyllia elegans. Determining predictors of B. elegans abundance, distribution, and size is important for ecological research in the eastern Pacific Ocean because changes observed over time could be an indication of realized impact from climate change and ocean acidification on calcifying organisms. Though reef corals are heavily studied, little is known about temperate, solitary corals. We studied B. elegans in the San Juan Islands in transect photos from 2008-2011 at 11 sites. At two of the sites, we analyzed photos to determine the distributions of size and abundance at 3-27 m depth. At all of the sites, we evaluated the effect of flow rate on coral size and population density by grouping the data from depths between 15-21m at the 11 sites into 4 categories of flow: low flow, medium flow, high flow, and very high flow. We used multiple statistical tests, including the Gaussian General Linear Model and the Poisson General Linear Model, with ANOVA to analyze the data. We found that the distributions of B. elegans vary by site, depth, and year. The results tell us that each site is unique. Even though some of these sites are separated by mere meters, characterized by the same flow rates, and evaluated on equivalent slopes, they appear to differ enough to create measurable variance. The patterns we found will need to be explained by researching these sites longer and adding additional site variables, such as pH. Fluctuations in pH, potentially caused by changes in rates of upwelling in the northern Pacific Ocean, could cause short term trends of increasing population size of calcifying organisms when pH is higher, but significantly reduced populations when pH is lowered by increased upwelling.