Over the past decade, measurements of hydrogen isotopes of lipid biomarkers, in particular leaf waxes, have been used to reconstruct past climate change. This method is appealing because lipids are well preserved in sediment and their hydrogen isotope ratio is primarily controlled by the hydrogen isotope ratio of their source water, which itself is controlled by factors such as precipitation amount and temperature. However, it has been shown that the isotopic difference between source water and lipids is distinctive among different plant species. In particular, it has been shown that salinity strongly affects the hydrogen isotope ratio of lipids produced by mangroves, but the mechanism that controls this relationship is unknown. Plants, including mangroves, take in water mainly from surrounding source water, but the deuterium to hydrogen ratio within the plant may be impacted by differences in transpiration rate, photosynthetic rate and respiratory water production. The photosynthetic rate (mol CO2 m-2s-1), internal carbon, (μmol CO2/ mol air) and conductance (mol H2O m-2s-1) of three species of mangrove, Rhizophora apiculata, Avicennia germinans, and Xylocarpus granatum, were measured at six different salinities from 5 to 30 ppt. The date, time, and leaf number were also recorded as additional measurements. Determining whether salinity, time of day and/or differences among species affects photosynthetic rate, internal carbon, and conductance is important in comparing the biosynthetic pathways of the three species of mangroves. It will allow us to investigate the cause of increased deuterium discrimination in mangroves at high salinity.